LINKS is a genomics application for scaffolding genome assemblies with long reads, such as those produced by Oxford Nanopore Technologies Ltd. or PacBio It can be used to scaffold high-quality draft ...
python 2.7.x (numpy, scipy, seaborn, pyBigWig, statsmodels, pysam) IEDB stand-alone (Note: IRIS is only tested on 20130222 2.15.5) Snakefile describes the IRIS pipeline. The configuration for running ...